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Phylogenetics

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Phylogenetics is the study of the evolutionary history of life.

Clade of the fish tree of life
Clade of the fish tree of life

Scientists use this field to understand how different living things are related. They do this through a process called phylogenetic inference. This means they look at observable characteristics to find connections. They might look at the shape of a body, or they might look at DNA. They can also look at protein amino acid sequences. These pieces of data help them build a map of life.

GraphRepresentation
GraphRepresentation

To show these relationships, scientists create a phylogenetic tree. This is a special diagram that shows how organisms are linked. The tips of the tree represent the things being studied. These can be living animals or even fossils.

PHILYP drawgram
PHILYP drawgram

Some trees are called rooted trees. A rooted tree shows a common ancestor for all the groups on it. Other trees are unrooted. An unrooted tree does not show a starting point or a direction. It is more like a network of connections.

Haeckel arbol bn
Haeckel arbol bn

This science has a long and interesting history. The word phylogeny comes from Greek words meaning tribe and origin. The idea of using simple explanations goes back to Aristotle. In the 1300s, William of Ockham shared a principle called parsimony. This principle suggests we should find the simplest explanation possible. Later, in 1866, Ernst Haeckel used the term phylogeny. He had a theory called recapitulation theory. This theory suggested that an embryo's growth mirrors its ancestors. Most scientists today have rejected that specific idea.

Bronn tree
Bronn tree

Phylogenetics is used for many important jobs today. In medicine, it helps doctors study how cancer cells change. Scientists use whole genome sequencing to see how tumors grow. It also helps in the search for new medicines. For example, some venoms from animals are used to make drugs. Scientists look for related species that might have similar useful traits.

Accuracy increase sites per taxon
Accuracy increase sites per taxon

In forensic science, these tools help check DNA evidence in court. It can even be used to track the history of HIV genes.

WebTree
WebTree

Understanding these trees helps us organize the natural world. In the 1700s, Carolus Linnaeus created a famous system for classification. He used physical traits to group living things together. Today, scientists use biochemistry and DNA to do this work. Some scientists use a method called cladistics. This method only groups things based on shared, new traits. Others use evolutionary taxonomy to find a middle ground. This helps us see both how things are different and how they are related.

Edward Hitchcock Paleontological Chart
Edward Hitchcock Paleontological Chart
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🖼️ Images & Media (10)
File:Clade of the fish tree of life.png
Clade of the fish tree of life.png
File:Accuracy increase sites per taxon.png
Accuracy increase sites per taxon.png
File:Bronn tree.gif
Bronn tree.gif
File:Haeckel arbol bn.png
Haeckel arbol bn.png
File:Edward Hitchcock Paleontological Chart.jpg
Edward Hitchcock Paleontological Chart.jpg
File:PHILYP drawgram.gif
PHILYP drawgram.gif
File:Fig. S6. Phylogenetic subtree of P4ATPase in Fungi. Blue- Ascomycota; Red- Basidiomycota; Green- Zygomycota; Cyan- Chytridiomycota; Orange- Entomophthoromycota; Pink- Mucoromycota and Purple- Glomeromycota..jpg
Fig. S6. Phylogenetic subtree of P4ATPase...
File:WebTree.jpg
WebTree.jpg
File:GraphRepresentation.jpg
GraphRepresentation.jpg
File:A-phylogeny-of-the-Indo-European-languages-showing-several-of-the-major-groups-and-the.png
A-phylogeny-of-the-Indo-European-languages...
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